Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGSQSGKASLSTSNRRRAVCDLCGTKATRKSSLQTGSTLVLKQCSRCHLRCCGECYVWRRYGSSFSTCYDEEHAVAEFAPVCRRCVAGPNLVANAPRFVWNKIFEYCDATAKHHLLQLCHATQMGVVLPYPHTRYGWSTFFEGRHFISKGANGEVYHTVVRRDITKELARSLIDALDAKVLADLSGRAVAVKAIRKSTVFSLRRWKHIQREVDTLRRCCHRHVVQLHFVAQGPSEVYIVLQYVAGGDLFDWLVRQQIPMEYDVVVIARQLLETLHFMHEVCGVVHRDIKPENILLQPVANPDVQRQGDGSLGADDGRSTEHTNSSDDLYIRLADFGYAKLLPQNEAGDATLSPAQISRPPLPPVPADAIGIVGPRAENVQRTEPRAKACKPLLISSTPCGTLGFAAPEILSAYNARKNALQRPRSNRQSAEQLGDAAKPRTPVDLVKRMDIFAAGVTICILLTGCEPFPCRSSKEHIEAVHEG-LDFSGPQWNYVSQPAKNLLRRMLAPRAAD--RPSAFECLNSSWMKHQGPYTDATSEVEDDDENARGKGLNRSASVWQLLSTSFQNSVHSLRKNEGWLFVQDAQGLVTTIPRQLVNGREDSESFSEALHSPNSCEQASTVY
3V8S Chain:D ((69-336))------------------------------------------------------------------------------------------------------------------------------------------EDYEVVKVIGRGAFGEVQLVRHKS----------------------TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDK-----------------------------SGHLKLADFGTCMKMNKEGM----------------------------------------------VRCDTAVGTPDYISPEVLKSQGG--------------------------DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND---------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3V8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1285 -136549 -106.26 -515.28
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain D : 0.63

3D Compatibility (PKB) : -106.26
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.387

(partial model without unconserved sides chains):
PDB file : Tito_3V8S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V8S-query.scw
PDB file : Tito_Scwrl_3V8S.pdb: