Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFSRKQFALSAIFVAILATGGSFMLLHENADAKAAPTAAQQAATVDVAPVVSKTITDWQEYSGRLEAIDQVDIRPQVSGKLIAVHFKDGSLVKKGDLLFTIDPRPFEAELNRAKAQLASAEAQVTYTASNLSRIQRLIQSNAVSRQELDLAENDARSANANLQAARAAVQSARLNLEYTRITAPVSGRISRAEVTVGNVVSAGNGAQVLTSLVSVSRLYASFDVDE-QTYLKYISNQRNSSQV--------PVYMGLANETGFTREGTINSIDNNLNTTSGTIRVRATFDNPNGVLLPGLYARIRLGGGQPRPAILISPTAVGVDQDKRFVVVVDAKNQTAYREVKLGAQQDGLQIVNSGLQAGDRIVVNGLQRIRPGDPVTPHLVPMPNSQITANATPQPQPTDKTSTPAKG
1T5E Chain:E ((29-259))-----------------------------------------------------------TELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQA-------QRYKLLVADQAVSKQQY-------ADANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQ-ANAMATVQQLDPIY--VDVTQPSTALLRLRRELASGQLERAGDNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQL-----------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1T5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 888 -33286 -37.48 -149.94
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain E : 0.68

3D Compatibility (PKB) : -37.48
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.618

(partial model without unconserved sides chains):
PDB file : Tito_1T5E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1T5E-query.scw
PDB file : Tito_Scwrl_1T5E.pdb: