Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MNFNIAKVMSIDQLETQIAELDNLPEHREIVTFMRRSAPLNTSQRTALEQHRDLILEYPVGDLRQHFEHPERPLTVEIGFGMGRSLVLMAKA-NPERNYVGIEVHVPGIAQCVYEAGMAELKN-LRVLDADAIQILREMPDN-SINCVQLYFPDPWQKKRHFKRRFVIHERMQLVEQKLELGGTFHAATDWEPYAEWMLDVLDNRPNLENLAGKGNSYPRPEWRPVTKFERRGIESGHKINDFIFKKIK
5FHR Chain:A ((1-213))DTKEQRILRYVQQNAKPGDPQSVLEAIDTYCTQKE--------WAMNVGDAKGQIMDAVIREYSP-------------SLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLD------HWKDRYLPDTLLLEKCGLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFE----CTHYSSYLELMKVVDGLEKAIYQGP-----------


General information:
TITO was launched using:
RESULT:

Template: 5FHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1018 -1296 -1.27 -6.35
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -1.27
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.385

(partial model without unconserved sides chains):
PDB file : Tito_5FHR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FHR-query.scw
PDB file : Tito_Scwrl_5FHR.pdb: