Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMNILHVAPE--Y---KWSKIFILPIANCQIQQGNKVWISAPNVLENTSELD-EAKFVSWNSKYKN---IF------KHIG-RLFLILK--MVHKYKINKVYFHTTVDSTLNIFILSLFSSAQLVYVNHGVPYLGYSS-IMQYILKLCEIVNINFSHRSITITQSMKQLLEPLNYKKKEITALIPGTLVGVKIPYSSYTDL-QSARALLKTNSDNSILKILYVGRLEHRKGIYDLIEAINHTNL-----NCELTVLGGTANELET-----E-LDLLKVKFEGFQ--SDLRSYYLNADLLCVPSHHEGFGQVYLEAAAHGVIPVCCNIPGPTDLIKHNSNGFIVEAKSPDSILELFEEINLKKFDLDAIQKRAFESVQAYESSQVISNNMDHF
3C48 Chain:B ((21-422))-MRVAMISMHTSPLQQ-GMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWL-SGQVGWLLRDLWRIPLIHTAHTLAAVK---TPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVS---PGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPS---TYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLY


General information:
TITO was launched using:
RESULT:

Template: 3C48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1843 -20155 -10.94 -58.08
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -10.94
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.364

(partial model without unconserved sides chains):
PDB file : Tito_3C48.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C48-query.scw
PDB file : Tito_Scwrl_3C48.pdb: