Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIRVETQMYKSYLFGSKSLLLISLSMLPMFVSAKTILILGDSISAGYGIDPKQGWVQLLQKRLDQQYPKQHKVVNASVSGETTSGALARLPKLLQTYKPEVVVIELGGNDGLRGQPPQMIQQNLSQLIQLSQKQKAKVILFGMKIPPNYGTAYSKAFENNYKTVSQKYQVKLLPFFLDGVAGQKQLMQNDLIHPNAQAQSKLLNLAYPYIKGAL-
1IVN Chain:A ((1-179))---------------------------------ADTLLILGDSLSAGYRMSASAAWPALLNDKW-----SKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVN


General information:
TITO was launched using:
RESULT:

Template: 1IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 893 -96525 -108.09 -545.34
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -108.09
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.601

(partial model without unconserved sides chains):
PDB file : Tito_1IVN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IVN-query.scw
PDB file : Tito_Scwrl_1IVN.pdb: