Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANVPSIRDMFPDFNDVFSPAFNDFLGVSSYPKVDLVENEKEYKLTADMPGCDKEDTTVEYSD-NTLTISANHESHTEDKEDGNYVRKERHSVSYKRSFYLP-NVDEEKITGTFKNGVLKLVLPKTAYQPKETKKIELN
5DS1 Chain:B ((2-94))------------------------------STPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKRE---KEGVKYLKMERRIGKLMRKFVLPEN-NIEAISAISQDGVLTVTVN---------------


General information:
TITO was launched using:
RESULT:

Template: 5DS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 310 -4132 -13.33 -46.95
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -13.33
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_5DS1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DS1-query.scw
PDB file : Tito_Scwrl_5DS1.pdb: