Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSLPFPLIEDIGELYMLDDIYDFLGEGTFASVFKAVSTTNRDVVQENQTVALKMIAKRNLSSDKLVRDVINEVHVLRQTAHPNCVRFIECVQTPVYVVIVTEYIEGVELFQALK-DQKFTEAMVLNVMRQLLSALAYLHNTLHIVHRDVKPENVIISTHEAPFRVVLVDFGLARSCERKRPRISRELATHFQRQRPIPVRNMSVESLDCDSPMLATPCGTLKYAAPETVQSITQSAQLSTTKNLLSRLDVYAAGIIMYVMLSGALPFKNFANKASLVMEMRNSL-SFEGPRWAGISAEAIDLNKALLNFDAVSRPHAAEALQYPWFKIYGSALRPLSTEEAQSTPGIPLDSSICERGAMTHAFEAMRATEAALYYNEEETASTSAPVTSHSGLRTPNSRCVSVPFGTNTSAFSNSSSTTTAAQTAQSGYFDFA
5IG1 Chain:B ((23-280))----------------------SVIGKGAFSTVHRCVNK------RTGEVCAVKVIALKSLRS-SEINKIKREIGICSSLQHEHIVSMRRAFRDESHFYLVFEYVSGGELFDEIVTRKFYNEKDASACMHQILSALQHCHS-KNIIHRDLKPENLLLASKDPNAPVKITDFGLAVIMEQG--------------------------------PTYFGFAGTPGYLSPEVIRR----------VPYDTAVDVWACGVILYILLVGYPPFWEEDHQ-KLYAQIKNCQYDFPSPEWDSVTTAAKELIKAMLEPNPKRRPTVQELLQHPWIARRD-------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1243 -85056 -68.43 -332.25
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -68.43
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_5IG1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IG1-query.scw
PDB file : Tito_Scwrl_5IG1.pdb: