Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWDLLPSAEQVGKLVP--SAEQIGKWVLSK------EQIDALFFYQCQVTIHYPGAERG------------KLLKYLAEPREP-IPLPKFQ--------GKLYYAISDSGC-KYREYSKGDPWPKG-LKQMDCFFGPRCTAIGKRKIVLQV----------------
1JTG Chain:B ((1-165))-AGVMTGAKFTQIQFGMTRQQVLDIAGAENCETGGSFGDSIHCRGHAAGDYYAYATFGFTSAAADAKVDSKSQEKLLAPSAPTLTLAKFNQVTVGMTRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYSSTGFYRGSAHLWFTDGVLQGKRQWDLV


General information:
TITO was launched using:
RESULT:

Template: 1JTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 470 4698 10.00 39.81
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : 10.00
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.179

(partial model without unconserved sides chains):
PDB file : Tito_1JTG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JTG-query.scw
PDB file : Tito_Scwrl_1JTG.pdb: