Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--VRICSLALGKIINGEVT-EYLED--TLQQLPGPAGNVVLEYEDFSIQLSLTKNCWPKLKRGSVVPKGYSLHVYSPTIEGHAATSAVLEGDDRLMLPGFDPLKMRVQFYE---WLVGLSWKPL-------KKGP-------
1LQK Chain:A ((1-134))MLTGLNHLTLA-VADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSREPQ-------YGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGDLRSRLAACRQAPYAGMRFA


General information:
TITO was launched using:
RESULT:

Template: 1LQK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 453 14396 31.78 128.54
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 31.78
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.291

(partial model without unconserved sides chains):
PDB file : Tito_1LQK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LQK-query.scw
PDB file : Tito_Scwrl_1LQK.pdb: