Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTYEYKSHIYLAETALNVKDLASQTAFYQQVIGLEILSQTETESILGLGG--KVLVQLIQAQESGEVREHYGLYHLAILLPTRKALADVLKHLTDLQIPLVGGA---DHGYSEAIYLEDLEGNGIELYRDKPVSTWDIREDGRIIGVTEALAAQDIYELGERVEPFILAEGTRMGHIHLSVKDSRKSSQFYQKVLGLEDKFSVP------SASWIAAGDYHHHLAVNEWRGKGLASRKQGLPGLAYYVIEVAHKKELLTIAQRAQEVDA--PIKWM-------TSSKLEITDSDGIVTRIRLAR
4Z6M Chain:B ((9-271))-VAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDENQIYLRSFEEFIHHNLVLTK-G-----PVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVER-L-HM--------RY------------DLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVQDTALTG----------GNGPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQ-


General information:
TITO was launched using:
RESULT:

Template: 4Z6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1265 -15781 -12.47 -64.94
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -12.47
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.401

(partial model without unconserved sides chains):
PDB file : Tito_4Z6M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Z6M-query.scw
PDB file : Tito_Scwrl_4Z6M.pdb: