Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQIIDGKALAAKLQGQLAEKTAKLKEE-TALVPGLVVILVGDNPASQVYVRNKERSALAAGSRSEVVRVPETITQEELLDLIAKYNQDPAWHGILVQLPLPKHIDEEAVLLAIDPEKDVDGFHPLNMGRLWSGH--PVMIPSTPAGIMEMFHEYGIDLEGKNAVVIGRSNIVGKPMAQLLLAKNATVTLTHSRT--HNLAKVAAKADILVVAIGRAKFVTADFVKPGAVVIDVGMNRDEN------GKLCGDVDYEAVAPLASHITPVPGGVGPMTITMLMEQTYQAALRTLDRK
4CJX Chain:B ((24-317))EAVVIDGRAVAKAIQKELTEEVALLERRYKGRRPGLSTIICGKRKDSQTYVRLKRKAAAACGFRNFSVELPANVTQEALEREVIRLNEEEACHSIVVQLPLPPHIDKVAALSKIKPEKDADCLLPVNVGQLHIRERNPAIVPCTASAVMELLRCSGVEICGKRVVVLGRGDIAGLPVATLLANEDATVTVVHSATPLCDIADIVRASDIVVSAAGQPGLVRGEWIKLGAAVIDVGTTPVADPSKVPGYRLVGDVCFDVARKRAAYITPVPGGVGPVTVSMLLKNTLTMFKRSVR--


General information:
TITO was launched using:
RESULT:

Template: 4CJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1556 -27561 -17.71 -97.39
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -17.71
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.706

(partial model without unconserved sides chains):
PDB file : Tito_4CJX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CJX-query.scw
PDB file : Tito_Scwrl_4CJX.pdb: