Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRAVDLIQKKRDGQELTSSEIEWLVEGYVSGTVPDYQMSAFAMAVYFKGMTTREISDLTMNMVKTGQEFDLSAIDGVKVNKHSTGGVGD-KVTLILVPLVASFGVPVAKMSGRGLGHTGGTIDKLESIKGYQVERSQEDFIRQVQDIGVSVIGQSDQL--VKADKLLYALRDVTATVDTIPLIASSVMSKKIAAGADAILLDVTVGEGAFMKTVDEARELAQTMVDLGKVVGRKTVAVITDMSQPLGRAIGNRLEILEALEIL-QGQGRQDITHFICELAQIMLGLANVNKTV----EEVRQHLENGQALAKFEEMVQAQGGDLED-LYRPV-NVAHVVEIPAQETGVISALPAMDFGLYAMRLGAGRAVKSDALDYETGIVFEKKIGDSVQKGEIVAKVYTNEKIP-PQLVTDFQKCVKISDEVKKIREIVEIIS
4GA5 Chain:A ((86-492))-ESVRYIKKKMHGEKLRKVEIEAIVRDIVDRKLRDIEISSFVTALEINGLDMDEIAALTIAMAETGDMLDIDR--KPIMDVHSIGGVPGNKTNILVVPIVAAAGLTIPKTSSRAITSAAGTADVVEVF-A-DVSFSLDEIKRIVEKVGACLVWG-GALNLAPADDITIKAERAL-SIDPTGLMLASIMSKKYAMGSQYVLIDIPTGKGVKVETVEEARSLARDFIELGKRLGQYVEVAITYGGQPIGHTVGPALEAREALSALMTGKGPGSLIEKATGLAGILLEMGGVA-PAGTGKKMAKEILESGKAWEKMKEIIEAQGGDPNIKPE-EIPIGDKTYTFTAATSGYVTAIDNRAITAIARAAGAPED-------KGAGIELYVKVGEKVKEGDPLFTIHAEHEARLDQAIVLARRTEPIRI-------------


General information:
TITO was launched using:
RESULT:

Template: 4GA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2416 -48275 -19.98 -121.91
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -19.98
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_4GA5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GA5-query.scw
PDB file : Tito_Scwrl_4GA5.pdb: