Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQFLDNIKDLEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETK--AHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFAGL
5J7D Chain:F ((3-103))-----------LDVTKDHWLLYVLLAQLPVMVLFRKDNDEEAKKVEYIVRELAQEFDGLIMVFELDTNK------APEIAKKYNITTTPTVAFFKNGEDKSVLIGAIPKDQLRDEILK


General information:
TITO was launched using:
RESULT:

Template: 5J7D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 405 -1116 -2.75 -11.38
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain F : 0.64

3D Compatibility (PKB) : -2.75
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.776

(partial model without unconserved sides chains):
PDB file : Tito_5J7D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5J7D-query.scw
PDB file : Tito_Scwrl_5J7D.pdb: