Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNTLAERLRYAMEVLPPKKIKGV-ELARAVGVKPPSVSDWLSGKSKTMEGENLLRASKFLNVNPSWLASGTGEIQTSTKDKFKQLDIEEFKKKYNISDSDEALLFSTIIEKPFIPSSKRWVPVKAYSKMGMDGYFTDIGYEGNAGDGYVPTHTAGSRAYAVKGTGDSMFPAIRNGWYVVCDPDADLVPNEFVQVCLKDGRCTIKEFVGINGGVLSLLSVNGGERFFFEMDEVESITAITDIVPPSQHRQEHPYSH 2FJR Chain:B ((7-188)) GWSNVDVLD---RICEAYGFSQKIQLANHFDIASSSLSNRYTRGAI--SYDFAAHCALETGANLQWLLTGEGEAFVNNRESS----------------------D--AKR----IEGFTLSEE------I----LK--------SDKQLSV----DAQFFTKPLTDGMAI-RSEGKIYFVDKQAS-LSDG-LWLVDIKGAISIRELTKLPGRKLHV-AGGKV-PFECGI---DDIKTLGRVVGVY----------

General information: TITO was launched using: RESULT: Template: 2FJR.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 773 13722 17.75 75.81 target 2D structure prediction score : 0.54 Monomeric hydrophicity matching model chain B : 0.64 3D Compatibility (PKB) : 17.75 2D Compatibility (Sec. Struct. Predict.) : 0.54 1D Compatibility (Hydrophobicity) : 0.64 QMean score : 0.307

(partial model without unconserved sides chains): PDB file : Tito_2FJR.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2FJR-query.scw PDB file : Tito_Scwrl_2FJR.pdb: