Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATPFWYNTALHLLKPFYRWRIKRRAESLELYQQECLERFGPFEAPKNVKAIWFHAVSVGETNAAQPLIEYYLKLGQPVLVTNTTKTGQARAKSLFLKEPYLDLFQAVYLPVDQKPLLKKFFELYQPKLLALVETELWPNLIDQAK-LQHVPCLLLNARLSEKSAKGYGKVSGLTAGMLKQLDWVLAQDSATRQRYVELGLDEHKSQVVGNIKFDIHAPEAFIKQAAQLRQQWYLE--NRQVVTIASTHAP-EEQQILEAFAPYLNSDRELVCIVVPRHPERFDEVFEICQNLNLITHRRSMGQSIHASTQVYLADSM--GELWLWYALSQVCFVGGSL------NEPGGGHNILEPMVLNVPTVVGPRYFNFQTIVDEFIDENAVLIAQDAQQVVDIWLACLAEPEATEQLVAQAHKVLQRNQG---SLQKHIGVINRYLAEKS
3OKP Chain:A ((77-381))--------------------------------------------------------------------------------------------------------------------AMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSMLP-GSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYE-STLRRLATD--VS-------------QNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVE-GLGIVYLEAQACGVPVI-AGTSGGAPETVTP--ATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPR---


General information:
TITO was launched using:
RESULT:

Template: 3OKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1559 -26197 -16.80 -90.33
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -16.80
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.389

(partial model without unconserved sides chains):
PDB file : Tito_3OKP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OKP-query.scw
PDB file : Tito_Scwrl_3OKP.pdb: