Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLNHFATELDELKQQGNFRQFT--QNVQHGRFITIQNKTMLNLASNDYLGLAADINLRQEFLDSYPLERSYFSSSSSRLLTGNFDEYEQLENSLSQAFSGRAALLFNSGYHMNIGILPAVADSKTLILADKLVHASMIDGIRLSGAQYVRYRHNDLQHLEQLLQKYHDDDQIERIIVVTESIFSMDGDETDLTALVQLKKRFAKTMLYVDEAHSIGVRGQQGLGCAEQYNVIQEIDFLVGTLGKALAAVGGYIICDQIIKDYLINKMRPLIFSTAQPPIVMAWANFIFKKVLMA--QSQREHLKNISQYLQQAVVQKGYVS-PSTSHIIPVIVGESQATIDKAKQVQESGFYAMPVRPPTVPKNSSRLRISLTSMVEQHELEALVSFL
1DJE Chain:A ((2-380))-SWQEKINAALDARGAADALRRRYPVAQGA-GRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQ--GAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPC----PGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHN-GWLMVDDAHGTGVIGEQGRGSCWLQKV--KPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTGIRPPTVPAGIARLRLTLTAAHEMQDIDRLLEVL


General information:
TITO was launched using:
RESULT:

Template: 1DJE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2102 -16764 -7.98 -44.82
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -7.98
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_1DJE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DJE-query.scw
PDB file : Tito_Scwrl_1DJE.pdb: