Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIDWQKEVEARKEDLLEDLKNLLRVNSERDDSKVTPDAPFGPGPRDALKHMLAYGERDGFKVKNVD-----------NYAGHI-DLG--EGDETLGIFGHMDVVPAG--DGWDTDPYEPVIKDGKIFARGSSDDKGPSMAAYYAMKIIKELDLKLSKKVRFVVGSDEESGWGDMAYYFEH--E---EEPDFGFSPDAEF----PIINGEKGNVSLALRFKGDNAGDYVLKSFVSGLRENMVPGTATAALQVPSADAAIAMEEAFYQFIEANPVSGTIEADNTYVKIELVGK--GAHGASPQS-GINAGSFLALFLDNYEFLG-----------------SAKQFIHVAAAYVHED--FYGE-KL--G--VAYEDEKMGKLTMNAGLFAFE-----E-NGTEEANFINMNFRFPKGVTVDGLQSDIEQTVGQEG--------ATVTRGARVMEPHYVPMDDPLVATLLQVYEDHTGEKGYEQIIGGGT--YGRLLK----RGV---AYGAMFPGYTDTMHQANEFMSLDDLFRATAIYADAIYRLAK
3DLJ Chain:A ((13-483))-LEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPV----PRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLGQSLPIPPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISKPAITYGTR---------------------------------------------------------------------GNSYFMVEVKCRDQDFHSGTFGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVS-MTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIR-DGSTIPIAKMFQEIVH--VVLIPLGAVDD----GEHSQNEKINRWNYIEGTKLFAAFFLEMAQ


General information:
TITO was launched using:
RESULT:

Template: 3DLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1707 24867 14.57 63.76
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 14.57
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_3DLJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DLJ-query.scw
PDB file : Tito_Scwrl_3DLJ.pdb: