Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MKDSIVEPEGMENTFELYNKTTVDKLIPILVPTDLNGHDVLLRFNGFLGEDYRYLKISDPQPLTE--
5JRT Chain:A ((11-74))VDFSITQFVRNLGLEHLMDIFEREQIT--LRVLVEM---GHKELKEI-GINAYGHREKLIKGVERLISGQ


General information:
TITO was launched using:
RESULT:

Template: 5JRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 191 3961 20.74 67.14
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 20.74
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.108

(partial model without unconserved sides chains):
PDB file : Tito_5JRT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JRT-query.scw
PDB file : Tito_Scwrl_5JRT.pdb: