Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALAKIVYASMTGNTEEIADIVAEAFENLDIEVEINECTQVDADEFEEADICVVATYTYDDGDLPDEIVDFYEDLQELDLLGKIYGVCGSGDTFYDEFCKSVDDFDAAFAKTGASKGAENVKVDLNAEEEDIENLEAFAKELVAKI
5LJL Chain:A ((2-146))MALAKIVFASMTGNTEEIADIVADKLRDLGLDVDVDECTTVDASDFLEADIAIVATYTYGDGELPDEMMDFYEDLADLNLNGKIYGVVGSGDTFYDEFCKAVDDFDRVFVSTGAEKGSECVKVDLSAEEEDIERLEQFAEELAAK-


General information:
TITO was launched using:
RESULT:

Template: 5LJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 809 -99935 -123.53 -689.21
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.92

3D Compatibility (PKB) : -123.53
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.92
QMean score : 0.600

(partial model without unconserved sides chains):
PDB file : Tito_5LJL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LJL-query.scw
PDB file : Tito_Scwrl_5LJL.pdb: