Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------MNKGLKIIGV-IMSLL------------LLSVFLAIALINAPYIMPEQLERFRFFTL--TNYYMQQYIFWAAVVFAVLA-----------------IIILLVVLFY-PKSRGTFVMKREDGKLTIDKKAIEGLVRSHLHEEEFIHSPK-----------VRIRSTKNRIHIHVNGDLKRTSSLV-GKTGVLM-QDIEEEVTKVLGTKETVKVAVTYSGY--------EEQEDTRDYKHSRVE--
4PX7 Chain:A ((1-258))GRSIARRTAVGAALLLVMPVAVWISGWRWQPGSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHMPVDKFYTLKRAERGNLVKEQLAEPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPEENREIAQREQESLEHH


General information:
TITO was launched using:
RESULT:

Template: 4PX7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 472 -22394 -47.44 -119.12
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -47.44
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.118

(partial model without unconserved sides chains):
PDB file : Tito_4PX7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PX7-query.scw
PDB file : Tito_Scwrl_4PX7.pdb: