Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDPSVMVGQYTLGKQIGSGNFSKVRLGTDP-QGRTWAIKIVDKRRLKKENMEDQMLREVAIMRSLRQQNVVKLQEVLQSSNHYYLVLELVTGGELFDKIVAA-KRFDEPTARRYFHQLIAGMYYCHSKGFAHRDLKPENLLL--DANGTLKISDFGLSNLQQDV-LLQTICGTPNYVAPEVLMERGYNGLSADIWSCGVVLYVMLAGRLPFEDRNMNVLLGKIERGDY----QMIRHISDPAKDLVARMLTVDPRKRISMEDVINHPWFQIDWNPRLLST
2X4F Chain:A ((89-352))-------YTVSKTEILG-----QVHKCEETATGLKLAAKIIKTRGMK---DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFV-SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLH-----


General information:
TITO was launched using:
RESULT:

Template: 2X4F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1205 -6702 -5.56 -26.81
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -5.56
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_2X4F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2X4F-query.scw
PDB file : Tito_Scwrl_2X4F.pdb: