Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceFGRRRDGRMPPWEWVTWKDFCRLTLKKGDEIQSQSKWVAKPG-PIGILIQ--PGVYES----FKTDKDCN----PKIRRGKLPDGYTLHGQLKYITPDLASMYNRVL----DDTKWWPFDSQEAPQTSTTVEKSL----
1JI1 Chain:A ((1-122))--AANDNN------VEWNG---LFHDQGPLFDNAPE--PTSTQSVTLKLRTFKGDITSANIKYWDTADNAFHWVPMVWDSNDPTG-TFDYWKGTIPASPSIKYYRFQINDGTSTAWY---NGNGPSSTEPNADDFYIIP


General information:
TITO was launched using:
RESULT:

Template: 1JI1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 464 29056 62.62 282.10
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 62.62
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.272

(partial model without unconserved sides chains):
PDB file : Tito_1JI1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JI1-query.scw
PDB file : Tito_Scwrl_1JI1.pdb: