Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVLVIMDPIETVNLKKDSTMAMLWAASRRGHELGYALQQDLYIDQGKAYGLISPLKVFEDYNHYYELGEKKKESIAAYDVVLMRKDPPFDMNFVYTTYVLEQAEREGSWIINKPQSLRDCNEKLFATQFPE----LQVPTLVTSQQSLIREFITE-H-GDVIVKPLDGMGGMGIFRLYQDGVNIGSTLEMLTELGTRPIMAQRYIPEIVEGDKRILMVNGEPIPYCLARIPQNGEVRGNLAAGGLGQARPLTENDKLIAAKVGPFLREKGLVFVGLDVIGN----YVTEINVTSPTCIREIDAQFGTSIADDLFDVLEAGRPA
4IWY Chain:A ((21-309))MKIAILSRDGT-----LYSCKRLREAAIQRGHLVEILDPLSCYMNINPAASSI-----------HYK-----GRKLPHFDAVIPRIGTAITF---YGTAALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQA-AESVIDAFRGLN-AHILVQEYIKEAQGCDIRCLVVGDEVVA-AIERRAKEGDFRSNLHRGGAASVASITPQEREIAIKAARTM---ALDVAGVDILRANRGPLVMEVNAS-PG-LEGIEKTTGIDIAGKMIRWIERH---


General information:
TITO was launched using:
RESULT:

Template: 4IWY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1446 -15850 -10.96 -56.81
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -10.96
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.385

(partial model without unconserved sides chains):
PDB file : Tito_4IWY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IWY-query.scw
PDB file : Tito_Scwrl_4IWY.pdb: