Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQFNQIEEQGETVMNMKTIKHGLNHLFAFENLPADMHSQAEDEIEQGLRFEELAIQDHER--MQNWLDITPNDRNAMWCYLRAALRGNADASFKLGIGYLNGQFGLDKNYTEAEKWLNKAASQGHPDAERCLQEAFSKLAF
4BWR Chain:A ((33-136))----------------------------------TKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGN-GVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFE---


General information:
TITO was launched using:
RESULT:

Template: 4BWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 422 26510 62.82 259.90
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 62.82
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_4BWR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BWR-query.scw
PDB file : Tito_Scwrl_4BWR.pdb: