Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPAIRRTVTFPEISMERLKSILGAYNGHLKQIEQRLDVKITHRGDVFYIDGEIDAVGRAEALLQRLYEETEASQQISADLLHLLIQSSQTERNFELVGEEMDEHDAPMDVYFQTRKGRINPRGANQKRYVQRILQSDISFGVGPAGTGKTYLAVAAAVDMLERNEIQRILLVRPAVEAGEKLGFLPGDLTQKIDPYLRPLYDALYEMLGFEKVAKLIERQVIEVAPLAYMRGRTLNHSFVILDEAQNTTPEQMKMFLTRLGF---------GSRAVITGDITQVDLPRGQQSGLAHALRVLEN-IKEIHITRFHSRDVVRHQLVQKIVEAYEAWDGEQQRLNAEARAERKARQEALIAENDTAADLQHQDA
5FHH Chain:A ((6-193))------------------------------------------------------------------------------------------------------------------------PQLSEEQAAVLRAVLKGQSIFFTGSAGTGKSYLLKRILGSLPP----TGTVATASTGVAACHIGG--T-----------TLHAFAGIGSGQAPLAQC-----VALAQRPGVRQGWLNCQRLVIDEISMVEADLFDKLEAVARAVRQQNKPFGGIQLIICGDFLQL--P-------PPRFCFQSKSWKRCVPVTLELTKVWRQA-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 780 -66468 -85.22 -410.30
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -85.22
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.396

(partial model without unconserved sides chains):
PDB file : Tito_5FHH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FHH-query.scw
PDB file : Tito_Scwrl_5FHH.pdb: