Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVSTPCKLRGDDFMAKISKYKKKNGQVAWMYKGHIATDPRTGEKINTTRRGFSSKQEAQKDYDEYRHQILYGVKKKAPDMTFEDLYNEWITHQR-TSVKASTIAISVRYANNQILPAFGKLKLSNISVPYCQKVVDEWHSKY---ESYDYMRKQTAQILRYGVAMQYIDNNPMEKTLLPRKKEYEKNRKFYSKEELNNLLDAFKDFGNMKQYAFFRLLAYTGMRKSEVLALQWKDIDTFNKELHVNKTLAVDEFGKVIIQSPKTRASRRVISLDTETLSILNNWKLQQKEEYLKLGYNTSSKEQHVFTTVK---NTLYIPNTVNDWLRYILKKYNLPRITPHGFRHTHASLLLEAGESVKVVQQRLGHENSKVTLDIYAHITNNAPKKTGQDFADMMAHQ
4A8E Chain:A ((9-277))---------------------------------------------------------------------------------RDDTIEEFATYLELEGKSRNTVRMYTYYISKFFE-E-----GHSPTARDALRFLAKLKRKGYSTRSLNLVIQALKAYFKFEGLD-----SEAEKLKTPKM--PKTLPKSLTEEEVRRIINAAET---LRDRLILLLLYGAGLRVSELCNLRVEDVNFEYGVIVVR--------------GGKG-GKDRVVPISESLLSEIKRYLESRN-----------DDSPYLFVEMKRKRKDKLSPKTVWRLVKKYGRK-AGVELTPHQLRHSFATHMLERGIDIRIIQELLGH-----T-QIYTKVSTKHLKEAVKKAK------


General information:
TITO was launched using:
RESULT:

Template: 4A8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 987 22502 22.80 87.56
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 22.80
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.379

(partial model without unconserved sides chains):
PDB file : Tito_4A8E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A8E-query.scw
PDB file : Tito_Scwrl_4A8E.pdb: