Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSIAFVGVSAVPPLERQKQRLANMDPSVYAVFEECRYKSLLAICHLARIIDAAMRGLDESTQVPASQPCEDTSHHDCALRSAANADREEPVGRPIADPTISRGSNEDLPLFIPLMDDNSDVSFCSMLHVEAESSSNASGLGYLSENAAKERSKQSTDMKATSHAALGNRERDVALFPHLNGHWECGIFGGKRVYIDTGGLYLGRGATALVYEGWMVVTDAMDGSEVCLAKVPVAIKEVTYNAKDRRLHDLYELAVNLRLNMVHPGIVHSYYAGTYMPRLAGFRSAEKAMVYAHLVLARSVTGSVADVLKRSGPFPESEIKRCMTEILSALQCVHEDHNCVHNDVKPHNILIFDDSSAYYAEFKYQIIDLTDIAPATPIEDVLRDLAAERKQQQNIFSERGTVMYMSPESCL---GLGTLTSNDVWSLGITAFHMATGTLPWRPLERQYPSMILNGYRRKFTLRSLVDMHVNDAFGASGSCYPTGTDNPLHADSDGKPRARFHASSAPGSRATGGASCTSQVFCDQYKGFGPILDMLDEVSVSSEFRSFLEQCLTENPVKRPTCRQLRSHPFVKDVTVASQH
5J5T Chain:A ((9-268))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IQRIGSGTYGDVYKARNVNT----G-------ELAAIKVIKLEPGE--DFAVVQQEIIMMKDCKHPNIVAYFGSYL-----------RRDKLWICMEFCG--GGSLQDIYHVTGPLSELQIAYVSRETLQGLYYLHSK-GKMHRDIKGANILLTDNGH-------VKLADFGVSAQITATI-------------A---AFIGTPYWMAPEVAAVERKGGYNQLCDLWAVGITAIELAELQPPMFDLHPMRALFL------------MTK----------------------------------------------------SNF------QPPKL--KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPFVTQH------


General information:
TITO was launched using:
RESULT:

Template: 5J5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1128 -83687 -74.19 -332.09
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -74.19
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.398

(partial model without unconserved sides chains):
PDB file : Tito_5J5T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5J5T-query.scw
PDB file : Tito_Scwrl_5J5T.pdb: