Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWNVGSSNRNKAENLLRGKRDGTFLVRESSKQG-CYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHY
2LNW Chain:A ((24-98))WFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEA-KKFDSLLELVEYY


General information:
TITO was launched using:
RESULT:

Template: 2LNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 257 -14920 -58.05 -201.61
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -58.05
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.738

(partial model without unconserved sides chains):
PDB file : Tito_2LNW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LNW-query.scw
PDB file : Tito_Scwrl_2LNW.pdb: