Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHYH
1JYQ Chain:B ((5-80))WFFGKIPRAKAEEMLSKQ-RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFN-SLNELVDYH


General information:
TITO was launched using:
RESULT:

Template: 1JYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 275 -39388 -143.23 -518.26
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -143.23
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.430

(partial model without unconserved sides chains):
PDB file : Tito_1JYQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JYQ-query.scw
PDB file : Tito_Scwrl_1JYQ.pdb: