Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVAGLTNGELIAPMTYEEMVTSDFFEAWFQKFLLPTLTTPSVIIMDNARFHRMGKLELLCEEFGHKLLPLPPYSPEYNPIE-KTWAYIKKNLKKVLPSCNTFYEALFSCSCFN-----------------------------
3HOT Chain:A ((5-345))VPNKEQTRTVLIFCFHLKKTAAESHRMLVEAFGEQVPTVKTCERWFQRFKSGDFDVDDKEHGKPPKRYEDAELQALLDEDDAQTQKQLAEQLEVSQQAVSNRLREMGKIQKVGRWVPHELNERQMERRKNTCEILLSRYKRKSFLHRIVTGDEKWIFFVNPKRKKSYVDPGQPATSTARPNRFGKKTMLCVWWDQSGVIYYELLKPGETVNAARYQQQLINLNRALQRKR---PEYQHRVIFLHDNAPSHTARAVRDTLETLNWEVLPHAAYSPDLAPSDYHLFASMGHALAEQRFDSYESVKKWLDEWFAAKDDEFYWRGIHKLPERWEKCVASDGKYFE


General information:
TITO was launched using:
RESULT:

Template: 3HOT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 279 -11166 -40.02 -102.44
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -40.02
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.364

(partial model without unconserved sides chains):
PDB file : Tito_3HOT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HOT-query.scw
PDB file : Tito_Scwrl_3HOT.pdb: