Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPEFLESAEFYNRRYHNFSSSVIVPMALLLVFLLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILVNHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQKKQLEYLQKSLQEGENHFPEEDKF-GYQAT-------FRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKIRDYQTAKSAI--ETGTSLAGQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLATYRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELSLLAQKILEAESGKKVQGNLLD--KGKITASEDGVLHLNPETSDSSMVAEGTLLAQLYPSLEREGKAKLTAY--LSSKDVARIKVGDSVRYTTTHDAGNQLFLDSTITSIDATATKTEKGN---FFKIEAETNLTSEQAEKLRY-GVEGRLQMITGKKSYLRYYLDQFLNKE--
4RP9 Chain:A ((6-456))-----NIFTVFFNQVMTN------APLLLGIVTCLGYILL-RKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGI-----NGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSF-GIDTVQAMAGKVHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDA


General information:
TITO was launched using:
RESULT:

Template: 4RP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2448 -106997 -43.71 -248.25
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -43.71
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.177

(partial model without unconserved sides chains):
PDB file : Tito_4RP9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RP9-query.scw
PDB file : Tito_Scwrl_4RP9.pdb: