Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQKNNKKKNKRKNLLTNILAGFLILLSLALIFNTQIRNIFIVWNTNKYQVSQVSKEKLEENQDTEGNFDFDSVKAISSEAVLTSQWDAQKLPVIGGIAIPELEMNLPIFKGLDNVNLFYGAGTMKREQVMG-EGNYSLASHHIFGVDNANKMLFSPLDNAKNGMKIYLTDKNKVYTYEIREVKRVTPDRVDEVDDRDGVNEITLVTCEDLAATERIIVKGDLKETKDYSQTSDEILTAFNQPYKQFY
3RCC Chain:N ((10-154))-----------------------------------------------------------------------------------------HNLPVIGGIAIPDVEINLPIFKGLGNTELSYGAGTMKENQIMGGPNNYALASHHVF--------LFSPLEHAKKGMKVYLTDKSKVYTYTITEISKVTPEHVEVIDDTPGKSQLTLVTCTDPEATERIIVHAELEKTGEFSTADE--------------


General information:
TITO was launched using:
RESULT:

Template: 3RCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain N - contact count / total energy / energy per contact / energy per residue : 645 -15407 -23.89 -113.29
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain N : 0.75

3D Compatibility (PKB) : -23.89
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.600

(partial model without unconserved sides chains):
PDB file : Tito_3RCC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RCC-query.scw
PDB file : Tito_Scwrl_3RCC.pdb: