Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSVTFFIGEERLKIKIGLASICLLGLATSHVAANETEVAKTSQDTTTASSSSEQNQSSNKTQTSAEVQTNAAAYWDGDYYVKDDGSKAQSEWIFDNYYKAWFYINSDGRYSQNEWHGNYYLKSGGYMAQNEWIYDSNYKSWFYLKSDGAYAHQEWQLIGNKWYYFKKWGYMAKSQWQGSYFLNGQGAMIQNEWLYDPAYSAYFYLKSDGTYANQEWQKVGGKWYYFKKWGYMARNEWQGNYYLTGSGAMATDEVIMDGARYIFAASGELKEKKDLNVGWVHRDGKRYFFNNREEQVGTEHAKKIIDISEHNGRINDWKKVIDENKVDGVIVRLGYS-GKEDKELAHNIKELNRLGIPYGVYLYTYAENETDAENDAKQTIELIKKYNMNLSYPIYYDVENWEYVNKSKRAPSDTDTWVKIINKYMDTMKQAGYQNVYVYSYRSLLQTRLKHPDILKHVNWVAAYTNALEWENPYYSGEKGWQYTSSEYMKGIQGRVDVSVWY
3HMC Chain:A ((3-180))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMGHIIDISKWNGDI-NWSIAK--QHIDFIIARVQDGSNYVDPLYKGYVQAMKQHGIPFGNYAFCRFVSIADAKKEAQDFWNRGDK----SATVWVADVEVKTM-----------NDMRAGTQAFIDELYRLGAKKVGLYVGHHMYTPFGM-ANVKSDFVWIPRYGGNKPA-----YPCDIWQYTETGNVPGI-GKCDLNSLI


General information:
TITO was launched using:
RESULT:

Template: 3HMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 960 -30869 -32.15 -174.40
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -32.15
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_3HMC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HMC-query.scw
PDB file : Tito_Scwrl_3HMC.pdb: