Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------------MKNLQNKLK-----HLEKDNHMSLSDEEQFDSLKSFAKKYGSAMISGILIALIAFFGWEYWQKRNLATSQTETAKVQQLMDEANATADNPNALASITASADKIVKD-DIDSVQAIQTQFVLAKLAYEKQDYAAAEKALKKVEN--SKVKDEGLIQVVKLRLADAQLAQNKYDEALKTLSGDVDPAFKATVEELRGDIFVAKKDID---SAKKAYQAAWDSLL-ERKQERQILQIKLESVGVLVEDPQIERPILETQVEES---------------------------------------------------
3Q15 Chain:A ((6-378))AIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPTVTELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFV--SDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY


General information:
TITO was launched using:
RESULT:

Template: 3Q15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1045 41986 40.18 170.67
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 40.18
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.345

(partial model without unconserved sides chains):
PDB file : Tito_3Q15.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q15-query.scw
PDB file : Tito_Scwrl_3Q15.pdb: