Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVSDELIIGLVKERIAQPDCVNGCIFDGFPRTIPQAEALE----KEGISIDHVIEIDVPDEEIVKRLSGRRQHPASGRVYHVVYNPPKVEGKDDETGEDLVQRPDDQEETIRKRLASYHTETEQLVGFYQGRAASGENAPTYDKLDGLRTIEDVQKDLFNILDK
5G41 Chain:A ((1-187))MNLVLMGLPGAGKGTQAEKIVEKYGIPHISTGDMFRAAIKEGTELGLKAKSFMDKGELVPDEVTIGIVRERLSKDDCKKGFLLDGFPRTVAQAEALDNILSELGKKLDYVINIEVPKEELMERLTGRRICKTCGATYHLIFNPPKVEGICDKDGGELYQRADDNPETVANRLDVNMKQTQPLLDFYE----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5G41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 777 -39500 -50.84 -215.84
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -50.84
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_5G41.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5G41-query.scw
PDB file : Tito_Scwrl_5G41.pdb: