Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIIGYARTTINDVDLTTQVDQLSDFGCQ--EIFHETYEVEQNDSTAVHLESVIADMQQGDALVICQLHRLGKSTRQLTELTQLFKDRGLHLISLDEGIDTR-EMGKIYFQLMENLANMECALIKERTLVGLDEARKKGKIGGRPKIDAKTIKKIRRLYYEKKETIQFISSKCGVSVGTCYKYINLPEKEIEQLCI
2GM5 Chain:C ((2-125))-ALFGYARVS-----LDIQVRALKDAGVKANRIFTDKAS----S-DRKGLDLLRMKVKEGDVILVKKLDHLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDSYIGKMVVTILSAVAQAERQRILER---------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 482 -6949 -14.42 -61.50
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain C : 0.69

3D Compatibility (PKB) : -14.42
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_2GM5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GM5-query.scw
PDB file : Tito_Scwrl_2GM5.pdb: