Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKMKKIDILSRLKNAGVIAVVRGKSKEEALNACHAIIKGGLTGIELTFTVPQADQVIKELLSFYKDQPEIVIGAGTVLDAVTARLAILAGAEYIVSPSFDQETAEMCNLYQIPYLPGCMTITEIKTALKSGVDIVKLFPGSAYGPSIISAFKAPMPQ-VNIMPTGGVSLDNMKEWFDAGVVTVGVGGNLLAPAATGDFDKVTEVAQQYAAKMKEIKR---------------------------------------------------------------------
4QCC Chain:A ((5-274))-------------TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKA--LIGAGTVLKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLYRAG--QSVERTAQQAAAFVKAYREAQKQKEQRQDQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEA


General information:
TITO was launched using:
RESULT:

Template: 4QCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1177 -143668 -122.06 -718.34
target 2D structure prediction score : 0.82
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -122.06
2D Compatibility (Sec. Struct. Predict.) : 0.82
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.625

(partial model without unconserved sides chains):
PDB file : Tito_4QCC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QCC-query.scw
PDB file : Tito_Scwrl_4QCC.pdb: