Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKTLQFGITNFEIDFKDLVMNTMIKNKRFENDVEFRGADIKDSRAVVILLHGRRQNADTIYELAEKI--GFTDITYILPLAPELT-----------WYPRGFMR-DLEDNQPYLSVALERIHYIITDLKNQNIKPENIFLMGFSQGACIVSQYLWEN-PQKLGGVIAFTGGLFGPELTYTSHEGLPINGTQLIFTGGKEDSWVPEQRVRDTAALFEKLGGNVTTKIYSGRDHLVSDEEVELAKTLLNI--
1AUO Chain:A ((1-218))MTEPLILQPA-------------------------------KPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYA--PTFGDELELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVLPQEIHDIGAWLAARLG


General information:
TITO was launched using:
RESULT:

Template: 1AUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1094 -29636 -27.09 -147.44
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -27.09
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.592

(partial model without unconserved sides chains):
PDB file : Tito_1AUO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1AUO-query.scw
PDB file : Tito_Scwrl_1AUO.pdb: