Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEARVIGL-EKLGKHDVELVGGKNSSLGEMISHLSNAGVSVPGGFATTADAYREFLDQ-----SGLNARIQAELAELNVDD---------------------------------------VNALAETGAKIRQWIVET--PLTPGLEQEIREAFAALSNGNPDIAVAVRSSATAEDLPDASFAGQQETFLNIR------------GIDNVLIAVKEVFASLFNDRAIAYRVHQGFEHSLVALSAGVQRMVRSETG---AAGVMFTLDTESGFRDVVFITASYGLGEMVVQGAVNPDEFYLSKPLLNAGKHAVLRRNLGSKHQKMIYGEEGSAGKSVVVVDVEKQERQQFALNDHELQELAKQALIIEKHYG---APMDIEWAKDGDDGQIYIVQARPETVKSRQNVGTMERYL---LKQKGTVLCEGRSIGQRIGSGKVRI-VNSIKEMDKVQDGDVLVSDMTDPDWEPVMKRAAAIITNRGGRTCHAAIITRELGVPAIVGCGNATE------------VLTDGQEVTVSCAEGDTGFIYEGAL------DFEVQRNSIESMPKLSFKIMMNVGNPDRAFDFAQIPNEGIGLARLEFIINRMIGVHPKALLNIESLPRETRAAVMTRTAGYASPVEFYVEKLVEGIATLAAAFADKPVIVRMSDFKSNEY------------------ANLIGGKLYEPEEENPMLGFRGASRYI--SDNFRDCFELECRALKKVRDEMGL-TNIQIMIPFVRTVSEAKRVIELLAQNGLKRGEN-----GLKVIMMCELPTNALLAEQFLEHFDGFSIGSNDLTQLTLGLDRDSGIVSHLFDERD-------------AAVKALLSMAIHACRKAGK--YVGICGQGPSDHPDLAKWLMEQGIESVSLNPDSVLDTWFFLAEEKIKQI
1KBL Chain:A ((1-872))--AKWVYKFEEGNASMRNLLGGKGCNLAEMTI----LGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKKFGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTG-NPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGDW-GTAVNVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTPQPITQ-------------------------LENDMPDCYKQFMDLAMKLEKHFRDMQDMEFTIEEGKLYFLQTRNGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQLLHPTFNPAALKAGEVIGSALPASPGAAAGKVYFTADEAKAAHEKGERVILVRLETSPEDIEGMHAAEGILTVRGGMTSHAAVVARGMGTCCVSGCGEIKINEEAKTFELGGHTFAEGDYISLD-GSTGKIYKGDIETQEASVS-GSFERIMVWADKFRTLKVRTNADTPEDTLNAVKLGAEGIGLCRTEHMFF-----------EADRIMKIRKMILSDSVEAREEALNELIPFQKGDFKAMYKALEGRPMTVRYLDPPLHEFVPHTEEEQAELAKNMGLTLAEVKAKVDELHEFNPMMGHRGCRLAVTYPEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHGGD-PSSVEFCHKVGLNYVSCSPFRVPIARLAAAQAALNN-


General information:
TITO was launched using:
RESULT:

Template: 1KBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 4225 140982 33.37 189.49
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 33.37
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.264

(partial model without unconserved sides chains):
PDB file : Tito_1KBL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KBL-query.scw
PDB file : Tito_Scwrl_1KBL.pdb: