Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKGYEVNFDGLV-GPTHHYAGLSFGNEASTKNCNNLSNPKLAAKQGLLKMKALADMGMKQGVLAPHERPHVPMLRRLGFTGDDISVVAQAMR-YSPELLSSLSSASPMWTANAATVSPSADSQDERVHFTAANLNNKFHRSIEAETTSQVLQAIFKNERHFVHHEALPQVALFGDEGAANHNRLGGDYAKRGVQVFVYG-------QQHLNNGLPGPKRYPARQTREASEAIARLHRLDESH---TVFVQQNPDVIDQGVFHNDVIAVSNQQVSFHHQHAFLNQDQAFAEIRQKMASIGEDFISIEVPENRVTVDDAVATYLFNSQILTRPDGGMTIVVPEESRQNAAVWS------YLNDMIQMGTPIDAIQVYDLRESMRN--GGGPACLRLRVAL-----NETELNAVNPKVLMNDQLFMTLNQ-WVDKHYRDRLAQ--EDLADPHLLMESRMAFDELTKILGLGSVYPFQK----------------------
4OPU Chain:A ((2-453))M--KELKYDVLIIGGG--FAGSSAAYQLSRRG----------LKILLVDSKPWNRIGDKPCGDAVS-KAHFDKLGMPYPKGEELENKINGIKLYSPDM-------QTVWTVNHEGFELNAPLYNQRVLKEAQD------RGVEIWDLTTAMKPIFEDG--YVK-------------GAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGYPSIHEYYKKYLDKYAPDVDKSKLLVKGGALVPTRRPLYTMAWNG-IIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDF-SASGLWDMNICYVNEYGAKQASLDIFRRFLQKLSNDDINYGMKKKIIKEEDLLEASEKGDLHLSVADKAMRVISGLGRPSLLFKLKAVAESMKKIKELYLNYPRSPSSLGSWRREVDNVLTEFNKSLS


General information:
TITO was launched using:
RESULT:

Template: 4OPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2418 64561 26.70 160.60
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 26.70
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.245

(partial model without unconserved sides chains):
PDB file : Tito_4OPU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OPU-query.scw
PDB file : Tito_Scwrl_4OPU.pdb: