Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPAVKSNRPVNLSMGQVLAVNLRSPVAIASILHRLSGVIVFLLVPVLLWILDKSLSSPEGFDYVKNVV----FGNILVRFVVWVFVAGLIFHFIAGVKHLLADLGFAEELQSGRIAATISLILSVVAIIAAFVWIVF
2WQY Chain:P ((15-139))-KNTKSSRPLSPHI---SIYKW-SLPMAMSITHRGTGVALSLGVSLFSVA---ALLLPEQFPHYVAVVKSLSLSPALIYSAKFALVFPLSYHTWNGIRHLVWDMGKGFKLSQVEQSGVVVLILTLLSSAGIAA----


General information:
TITO was launched using:
RESULT:

Template: 2WQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 214 -27152 -126.88 -224.40
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain P : 0.71

3D Compatibility (PKB) : -126.88
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.186

(partial model without unconserved sides chains):
PDB file : Tito_2WQY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WQY-query.scw
PDB file : Tito_Scwrl_2WQY.pdb: