Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRQLQLDIEPQLDARISDFSGPGWGHVVDAVRQLHAGLVNRFYIYGGAGTGKSHLLSAICDSYLEVGKSAIKVSLLELLDAPIEAITCLEHYDLVALDDIESISGVPHWQKAVFHLMNNHEG----QLVFSSRVAPIELKLELPDLQSRLTQAVSVKVPSGSLYADRYALVTSVMARRGIHFDQQIVDYLLLHGPHQASVLLQTVAQLEKLLKGEKTKLSNATLRQIYALIDEYQQ
2KJQ Chain:A ((1-149))MGHHHHHHSHMDYPSFDKFLGTENAELVYVLRHKHG---QFIYVWGEEGAGKSHLLQAWVAQALEAGKNAAYIDA-----ASMPLTDAAFEAEYLAVDQVEKLGN--EEQALLFSIFNRFRNSGKGFLLLGSEYTPQQLVI-REDLRTRMAYCLVYEVKP----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2KJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 577 -51413 -89.10 -354.57
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -89.10
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.418

(partial model without unconserved sides chains):
PDB file : Tito_2KJQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KJQ-query.scw
PDB file : Tito_Scwrl_2KJQ.pdb: