Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKLLTTFRAVYETRNFSRAAEVLFLSQPAVSNQIKQLERELNIDLFQRNGRKEMLPTKQADLLYERTLVLLEEWEETQQKLLNEQNE-EEVCRIVASHTFAVYLLPQLMKHLIKRFPKVHFEIEITNSHESLEQVAKHESDFGFIEKPLETSGVQRYSLMEDQLVIAGDPK---------------SKLWLVREANSGVFHYTQRYFEE--MNIQDK-KMIVKSNDVIVALLKEGIGRSILSKRSVPENV---PMTPL--N----FHRYFYFIQR-TNLVSDQLLEIAEEILRYNESTETSHSEENLSW
3HHG Chain:E ((4-297))NSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQ-LSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSE---GYINLIERKVDIALRAGELDDSGLRARHLFDSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTW--AVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELGNNL----------


General information:
TITO was launched using:
RESULT:

Template: 3HHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1068 -52496 -49.15 -198.10
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain E : 0.71

3D Compatibility (PKB) : -49.15
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.421

(partial model without unconserved sides chains):
PDB file : Tito_3HHG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HHG-query.scw
PDB file : Tito_Scwrl_3HHG.pdb: