Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKFQPIINQIKEKEHQQKIKDLFAKI-TETYPQLDTTVKWNQP-MFTDHGTFII-AFSFAKNHFSIAPEKAAI-RALEKNIQEAGYVYTDNVIKVPWKSVINWELIEQLISFNIEDKKGHDKFWR-
2I8D Chain:A ((3-123))-GSLAEWYQRIPT-PDDLTRVESLFANMQAQFPQLKLEFKWNQPMFTD--HGTFIMGFNPSKKHLAVAIEPQ-TMTRFIPQIDKAGYDHSQI-IRFPWHKPLDEQLIHDLIAYTIDQKKDATTFWQR


General information:
TITO was launched using:
RESULT:

Template: 2I8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 242 3299 13.63 28.44
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 13.63
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.314

(partial model without unconserved sides chains):
PDB file : Tito_2I8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2I8D-query.scw
PDB file : Tito_Scwrl_2I8D.pdb: