Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEILRDIGMIARALDSISNIEFKEVDLTRGQYLYLVRICENPGIIQEKLAEMIKVDRTTTARAIKKLESNGMIERLEDKENKKIKKLYPTKKGAEIYPFIIRENNYSNAVALNGLSDEEAKQLEYLLNKVCKNVSEDWNFVKKGNKRIY
1Z9C Chain:C ((14-144))---LSFLLYASSREMTKQYKPLLDKLNITYPQYLALLLLWEHETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKEKAVDIPGTIL-G-LSKQSGEDLKQLKSALYTLLETLH--------------


General information:
TITO was launched using:
RESULT:

Template: 1Z9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 378 -47322 -125.19 -361.24
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain C : 0.69

3D Compatibility (PKB) : -125.19
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_1Z9C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Z9C-query.scw
PDB file : Tito_Scwrl_1Z9C.pdb: