Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMATPVTDPPKIIGRELHLDRLIGSGGFGEVYLAVRTKLATNPKHNFTFPAECVVKVMRRGLCTEEDVAAMNREVATLSSMDHPYIVAYIGAWVEAARGKFFGCYCLAMKYCEGGDLHGFIAQCIKAHRLPPVDVAVRIMAQVFSALNYSHSRRLIHRDIKPGNVFLTLQKSGVPDKAMVGDYGLVRSLEATRQLVKTRVGTPTYISPEIAAGEAYSTKTDIFSAGTMFYELLSLHRPFWKRMMTDQQLFREVLHRDPMPQFRAYTSSVYGTALADVIEACLTKHEANRATAYDALVRLTSPITAYVLKYAIPVYPEKDALTTSPPRPPAASSAPDGHASAADADGDAATARQRLERLFLVRKGTAVGARLTRLLSHNAELLFQVRVLVACRSDNTDHLENGLAELLWAFPDAEVPFQEVIDLVMSDYRQLAE
1KOB Chain:A ((50-305))------------YDYYDILEELGSGAFGVVHRCVEKATG----------RVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAFEDK------YEMVLILEFLSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKK---ASSVKIIDFGLATKLNPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED--DLETLQNVKRCDW-EFD-EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH---------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1KOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1159 -147865 -127.58 -577.60
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -127.58
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.322

(partial model without unconserved sides chains):
PDB file : Tito_1KOB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KOB-query.scw
PDB file : Tito_Scwrl_1KOB.pdb: