Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMLENDIKKVLVSHDEITEAAKKLGAQLTKDY--AGKNPILVGILKGSIPFMAELVKHIDTHIEMDFMMVSSYHGGTASSGVINIKQDVTQDIKGRHVLFVEDIIDTGQTLKNLRDMFKEREAASVKIATLLDKPEGRVVEIEADYTCFTIPNEFVVGYGLDYKENYRNLPYIGVLKEEVYSN
5KNR Chain:B ((10-175))-------EVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASS-----STTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDYAQRYRHLPYIG---------


General information:
TITO was launched using:
RESULT:

Template: 5KNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 745 -33130 -44.47 -208.36
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.84

3D Compatibility (PKB) : -44.47
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.555

(partial model without unconserved sides chains):
PDB file : Tito_5KNR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5KNR-query.scw
PDB file : Tito_Scwrl_5KNR.pdb: