Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLRFQSVFDIIGPVMIGPSSSHTAGA-VRIGKIVSSIFD----DTPTEVEFQLFNSFAKTYRGHGTDLALVAGILGM---DTDDPE-IP--------NSLEIAHKRGI----KIVWTIQKDSNAPHPNTT-KITV--KNAHKTISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQM-NVTREKAGEKAIMIIEVDSRNCDEAIEEIRKI-PHLHNVNFFK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4RQO Chain:A ((20-476))-----NISVFDLF-SIGIGPSSSHTVGPMLAANAFLQLLEQKNLFDKTQRVKVELYGSLALTGKGHGTDKAILNGLENKAPETVDPASMIPRMHEILDSNLLNLAGKKEIPFHEATDFLFLQKELLPKHSNGMRFSAFDGNANLLIEQVYYSIGGGFITTEE------DFDKNPPPYPF--ATATELLKLCKKH----HLTIAELMLVNEKTWR---------STAEIHKGILDIAKVMDDCINNGCKHDGVLPGGLNLKRRAPDLYRKLIFEQSDIMNHLNLYAMAVNEENAAGGRIVTAPTNGAAGIIPAVLKYCQQAHDRMSNEDIYTYFLTAAAIGILYKKGASISGAEVGCQGEVGVASSMAAAGLTAVLGGTIEQVENAAEIAMEHHLGMTCDPVLGLVQIPCIERNAMGAVKAVNATRMALIGDGQHQISLDKVIKTMKQTGMDMQSIYKETSMGGLAVNLPEC


General information:
TITO was launched using:
RESULT:

Template: 4RQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 892 3776 4.23 19.27
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 4.23
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.373

(partial model without unconserved sides chains):
PDB file : Tito_4RQO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RQO-query.scw
PDB file : Tito_Scwrl_4RQO.pdb: