Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFPSEQEQIEKFEKDHVAQHYFEVLRTLISKKSVFAQQV---GLKEVANYLGEIFKRVGAE-VEIDES------YT------APFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVR--NGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDLDKYLEKHAD-KLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVKSADVDI--HSSYGG-VVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFEPALNIEGIQSGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-D----KVELYYTLGEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPMHTV-FD-ALEVPMV--AFGLGNANSRDHGGDENVRIADYYTHIELVEELIRSYE
4G1P Chain:A ((4-475))-----SLTSVFQKID-SLKPQFFSRLTKAIQIPAVSSDESLRSKVFDKAKFISEQLSQSGFHDIKMVDLGIQPPP-STPNLSLPPVILSRFGSD-PSKKTVLVYGHYDVQPAQLEDGWDTEPFKLVIDEAKGIMKGRGVTDDTGPLLSWINVVDAFKASGQEFPVNLVTCFEGMEESGSLKLDELIKKEANGYFKGVDAVCISDNYWLGTKKPVLTYGLRGCNYYQTIIEG--PSADLHSGIFGGVVAEPMIDLMQVLGSLVDSKGKILIDGIDEMVAPLTEKEKALYKDIEFSV-EELNAATGSKTSLY-DKKEDILMHRWRYPSLSIHGVEGAFSAQGAKTVIPAKVFGKFSIRTVPDMDSEKLTSLVQKHCDAKFKSLNSPNKCRTELIHDGAYWVSDPFNAQFTAAKKATKLVYGV-DPDFTREGGSIPI-TLTFQDALNTSVLLLPMGRG--DDGAHSINEKLDISNFVGGMKTMAAYLQYY-


General information:
TITO was launched using:
RESULT:

Template: 4G1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2287 75833 33.16 172.35
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 33.16
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_4G1P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G1P-query.scw
PDB file : Tito_Scwrl_4G1P.pdb: