Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MSTLAKIEALLFVAGEDGIRVRQLAELLSLPPTGIQQSLGKLAQKYEKDPDSSLALIETSGAYRLVTKPQFAEILKEYSKAPINQSLSRAALETLSIIAYKQPITRIEIDAIRGVNSSGALAKLQAFDLIKEDGKKEVLGRPNLYVTTDYFLDYMGINHLEELPVIDELEIQAQESQLFGERIEEDENQ
3W6K Chain:B ((5-86))GALKPAKAIVEALLFAAGDEGLSLSQIAAVLEVSELEAKAVIEELQQDCRR-EERGIQLVELGGVFLLATKKEHAPYLKKLVE-------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W6K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 253 -5554 -21.95 -70.30
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : -21.95
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.801

(partial model without unconserved sides chains):
PDB file : Tito_3W6K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W6K-query.scw
PDB file : Tito_Scwrl_3W6K.pdb: